| 2003 - 2010 and 2016 - present | Armando Gonzalez | Missional Priest |
| 2016 - 2022 | Michael Carroll | Priest-in-Charge |
| 2012 - 2016 | Amy D. Welin | Priest-in-Charge |
| 2011 - 2012 | Robert Miner | Interim Rector |
| 2010 - 2011 | Norman MacLeod | Interim Rector |
| 1989 - 2010 | Dr. James G. Bradley | Rector |
| 1988 - 1989 | Jeffrey Dugan | Interim Rector |
| 1979 - 1987 | James G. Wilson | Rector |
| 1978 - 1979 | Peter Holroyd | Priest-in-Charge |
| 1970 - 1978 | Michael S. Kendall | Rector |
| 1960 - 1970 | DeWolf Perry | Rector |
| 1958 - 1960 | David O. Cowles | Priest-in-Charge |
| 1951 - 1958 | John R. Yunbglut | Rector |
| 1951 | Joseph Koci, Jr. | Priest-in-Charge |
| 1948 - 1951 | Robert M. Hatch | Rector |
| 1941 - 1948 | Francis O. Ayres | Rector |
| 1940 | Samuel A. Budde | Priest-in-Charge |
| 1901 - 1940 | John N. Lewis, Jr. Biography from the Waterbury Hall of Fame  | Rector |
| 1884 - 1901 | Edmund Rowland, D.D. | Rector |
| 1880 - 1883 | Rob Roy M. (McNulty) Converse, D.D. | Rector |
| 1877 - 1880 | Joel Foote Bingham, D.D. | Rector |
| 1837 - 1877 | Jacob L. Clark, D.D. | Rector |
| 1833 - 1836 | Allen C. Morgan | Rector |
| 1830 - 1832 | William Barlow | Rector |
| 1814 - 1830 | Alpheus Greer | Rector |
| 1807 - 1814 | Virgil Horace Barber | Rector |
| 1797 - 1806 | Tillotson Bronson, D.D. | Rector |
| 1796 - 1797 | William Green | Interim Rector |
| 1795 | Alexander V. Griswold, D.D. | Interim Rector |
| 1791 - 1793 | Seth Hart | Rector |
| 1790 - 1791 | David Foote | Rector |
| 1790 | Chauncey Prindle | Interim Rector |
| 1789 - 1790 | Solomon Blakeslee | Rector |
| 1759 - 1788 | James Scovil | Rector (First Resident Rector) |
| 1749 - 1759 | Richard Mansfield, D.D. | Missionary |
| 1744 - 1746 | James Lyons | Missionary |
| 1739 - 1743 | Theophilus Morris | Missionary |
| 1737 - 1739 | Jonathan Arnold | Missionary |